For the regions Northwest, Northeast and Southern Germany we examined the main allergic pollen (Hazel, Alder, Birch, grasses and Mugwort) for trends on the basis of the pollen counts of the Pollen Information Service (PID) reference-stations. From these stations information about changes on the start of the pollen season, the season length and the total amount as well as the peak-concentration of pollen during the last years (1988-2009 for Northwest and Southern Germany and 1994-2009 for Northeast Germany) are examined. Possible trends are analysed by means of the Mann-Kendall test for their significance. The results demonstrate that the changes, regarding the start of the pollen season and the total pollen amount, are strongest in Southern and Northeast Germany. Data show for all regions that tree pollen becomes the significant allergen.